Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
candidate regulatory elements
51
target gene predictions
46
chromatin state
32
accessible chromatin
24
gene expression
17
histone modifications
16
binding sites
9
eQTL
7
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
133
September, 2022
62
February, 2021
29
February, 2024
10
August, 2021
10
March, 2020
8
June, 2020
7
November, 2021
6
January, 2020
6
May, 2020
4
March, 2023
4
May, 2021
3
August, 2017
2
February, 2020
2
January, 2022
2
May, 2022
2
October, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
208
bed bed3+
43
bed bed9
28
bigWig
28
tsv
3
csv
1
bam
1
bigBed bed9
Organism
293
Homo sapiens
Biosample type
182
tissue
73
primary cell
31
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
286
AMP
7
ENCODE
Genome assembly (visualization)
260
hg19
95
GRCh38
2
hg18
BIOSAMPLE
TYPE
293 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
placenta
26
15
14
1
2
1
1
liver
13
10
9
4
1
2
1
7
1
1
renal pelvis
19
9
9
2
1
left renal pelvis
6
2
2
1
1
right renal pelvis
6
2
2
1
1
+ See 1 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
pancreatic endothelial cell
1
3
+ See 3 more…
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HTR-8/Svneo
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download