Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
71
accessible chromatin
67
target gene predictions
62
candidate regulatory elements
48
gene expression
38
chromatin state
33
differential activity
16
eQTL
11
variant allelic effects
10
histone modifications
8
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
107
September, 2022
54
February, 2021
47
March, 2023
34
May, 2021
26
February, 2024
20
January, 2021
20
November, 2021
9
March, 2020
8
August, 2021
8
June, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
March, 2024
1
October, 2022
Available data
233
bed bed3+
76
tsv
59
bigWig
34
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
373
Homo sapiens
Biosample type
191
tissue
136
primary cell
43
cell line
3
in vitro differentiated cells
Organ
947
epithelium
650
kidney
465
brain
460
connective tissue
373
musculature of body
310
lung
286
intestine
277
pancreas
265
vasculature
255
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
156
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
331
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
281
hg19
86
GRCh38
month_released!
March, 2024
BIOSAMPLE
TYPE
373 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
1
15
26
14
1
2
1
islet of Langerhans
6
1
11
3
13
1
1
2
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 9 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 15 more…
cell line
EndoC_BH1
8
1
8
3
1
GM18507
1
2
1
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download