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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
61
candidate regulatory elements
44
target gene predictions
38
chromatin state
30
accessible chromatin
25
gene expression
18
histone modifications
16
binding sites
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
109
September, 2022
49
February, 2021
30
February, 2024
10
August, 2021
10
March, 2020
9
June, 2020
7
November, 2021
4
March, 2023
4
May, 2021
3
August, 2017
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
May, 2022
2
October, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
175
bed bed3+
35
bed bed9
29
tsv
25
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
253
Homo sapiens
Biosample type
136
tissue
73
primary cell
37
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
246
AMP
7
ENCODE
Genome assembly (visualization)
219
hg19
85
GRCh38
2
hg18
BIOSAMPLE
TYPE
253 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
placenta
26
15
14
1
2
1
1
liver
13
10
9
4
1
2
1
7
1
1
Peyer's patch
7
3
3
1
right lobe of liver
2
1
1
1
1
3
germinal center
1
1
1
+ See 1 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
pancreatic endothelial cell
1
3
+ See 3 more…
cell line
HepG2
2
3
2
2
5
3
GM18507
1
2
1
1
1
HuH-7
1
1
1
1
1
1
HTR-8/Svneo
1
1
1
HuH-7.5
1
1
1
+ See 1 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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