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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
accessible chromatin
59
target gene predictions
candidate regulatory elements
49
gene expression
33
differential activity
30
chromatin state
16
eQTL
13
binding sites
13
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
57
September, 2022
47
March, 2023
35
February, 2021
35
May, 2021
26
February, 2024
20
January, 2021
18
November, 2021
9
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
171
bed bed3+
77
tsv
57
bigWig
26
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
304
Homo sapiens
Biosample type
132
primary cell
105
tissue
64
cell line
3
in vitro differentiated cells
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
264
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
211
hg19
75
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
304 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
chromatin state
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 14 more…
tissue
islet of Langerhans
6
1
11
3
13
2
1
1
2
2
2
pancreas
5
5
3
1
1
1
1
body of pancreas
5
2
4
1
1
3
prostate gland
1
2
2
1
2
2
endocrine pancreas
4
4
+ See 8 more…
cell line
EndoC_BH1
8
1
8
3
1
22Rv1
2
2
1
1
PC-3
1
1
1
1
1
RWPE1
1
1
1
1
1
LNCAP
1
1
1
1
+ See 10 more…
in vitro differentiated cells
pancreatic ductal cell
3
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