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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
84
candidate regulatory elements
21
binding sites
18
histone modifications
17
accessible chromatin
1
chromatin state
1
variant allelic effects
Date released
82
February, 2021
80
September, 2022
52
February, 2024
15
June, 2020
7
May, 2021
2
November, 2021
1
August, 2017
1
March, 2020
1
October, 2022
Available data
241
bed bed3+
40
bed bed9
11
tsv
2
bigWig
Organism
241
Homo sapiens
Biosample type
153
cell line
39
tissue
26
primary cell
22
in vitro differentiated cells
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
239
AMP
2
ENCODE
Genome assembly (visualization)
241
hg19
53
GRCh38
BIOSAMPLE
TYPE
241 results
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target gene predictions
candidate regulatory elements
binding sites
histone modifications
accessible chromatin
chromatin state
variant allelic effects
cell line
H1-hESC
39
1
2
1
1
H9
8
7
22Rv1
2
4
1
1
HUES8
4
1
1
LNCAP
1
2
1
1
1
+ See 24 more…
tissue
chorionic villus
4
8
prostate gland
2
4
2
2
1
trophoblast
3
4
1
1
embryonic facial prominence
1
1
1
first pancreatic bud
1
1
+ See 2 more…
primary cell
trophoblast cell
5
7
1
1
epithelial cell of prostate
3
4
primordial germ cell
1
1
luminal epithelial cell of prostatic duct
1
placental hematopoietic stem cell
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
2
4
mesodermal cell
1
4
1
trophoblast cell
2
2
ectodermal cell
1
2
cardiac mesoderm primordium
1
1
+ See 1 more…
stem cell
H1-hESC
1
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