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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
197
candidate regulatory elements
127
target gene predictions
118
chromatin state
60
histone modifications
56
accessible chromatin
36
Fine-mapped variants
31
eQTL
27
binding sites
20
gene expression
18
variant allelic effects
Date released
318
September, 2022
172
February, 2021
38
March, 2020
32
June, 2020
29
January, 2020
20
January, 2022
19
May, 2020
18
February, 2020
16
May, 2021
7
October, 2022
6
August, 2017
4
May, 2019
3
November, 2021
3
September, 2023
2
February, 2024
2
March, 2024
1
November, 2019
Available data
484
bed bed3+
112
bed bed9
68
tsv
24
bigWig
6
bigBed bed9
Organism
689
Homo sapiens
Biosample type
462
tissue
133
cell line
85
primary cell
9
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
687
AMP
3
ENCODE
Genome assembly (visualization)
644
hg19
203
GRCh38
BIOSAMPLE
TYPE
690 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
3
2
2
1
1
1
placenta
26
15
14
2
1
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
+ See 64 more…
cell line
22Rv1
4
2
2
1
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 20 more…
primary cell
trophoblast cell
7
5
4
1
1
epithelial cell of prostate
4
3
2
fibroblast of villous mesenchyme
2
1
1
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
+ See 16 more…
in vitro differentiated cells
trophoblast cell
2
2
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
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