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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
target gene predictions
49
chromatin state
46
candidate regulatory elements
15
accessible chromatin
3
eQTL
3
gene expression
1
binding sites
1
variant allelic effects
Date released
137
September, 2022
February, 2021
12
June, 2020
7
May, 2021
6
November, 2021
4
February, 2024
3
August, 2017
3
January, 2022
3
March, 2024
1
March, 2020
1
October, 2022
Available data
125
bed bed3+
46
bed bed9
3
bigWig
3
tsv
Organism
177
Homo sapiens
Biosample type
110
tissue
53
cell line
14
primary cell
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
171
AMP
6
ENCODE
Genome assembly (visualization)
171
hg19
57
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
177 results
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target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
eQTL
gene expression
binding sites
variant allelic effects
tissue
large intestine
14
13
13
1
sigmoid colon
7
5
5
1
transverse colon
5
4
4
1
1
prostate gland
2
2
2
1
1
colonic mucosa
2
3
2
+ See 7 more…
cell line
22Rv1
2
2
2
LNCaP clone FGC
2
2
2
HCT116
3
1
1
HT-29
2
1
1
1
PC-3
1
1
1
1
+ See 10 more…
primary cell
epithelial cell of prostate
3
2
2
colon epithelial cell
3
3
luminal epithelial cell of prostatic duct
1
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