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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
target gene predictions
46
candidate regulatory elements
46
chromatin state
15
accessible chromatin
3
eQTL
3
gene expression
1
binding sites
1
variant allelic effects
Date released
137
September, 2022
February, 2021
12
June, 2020
7
May, 2021
6
November, 2021
4
February, 2024
August, 2017
3
January, 2022
3
March, 2024
1
March, 2020
1
October, 2022
Available data
122
bed bed3+
46
bed bed9
3
bigWig
3
tsv
Organism
174
Homo sapiens
Biosample type
107
tissue
53
cell line
14
primary cell
Organ
750
epithelium
464
kidney
350
brain
344
connective tissue
280
musculature of body
243
pancreas
240
lung
216
vasculature
214
intestine
207
heart
186
limb
167
blood vessel
161
embryo
142
bodily fluid
135
blood
135
skin of body
127
liver
125
large intestine
113
extraembryonic component
92
eye
89
stomach
73
uterus
65
small intestine
64
adipose tissue
60
artery
59
adrenal gland
58
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
15
mouth
15
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
168
AMP
6
ENCODE
Genome assembly (visualization)
168
hg19
57
GRCh38
month_released!
February, 2021
August, 2017
BIOSAMPLE
TYPE
174 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
eQTL
gene expression
binding sites
variant allelic effects
tissue
large intestine
14
13
13
1
sigmoid colon
7
5
5
1
transverse colon
5
4
4
1
1
prostate gland
2
2
2
1
1
colonic mucosa
2
2
2
+ See 7 more…
cell line
22Rv1
2
2
2
LNCaP clone FGC
2
2
2
HCT116
3
1
1
HT-29
2
1
1
1
PC-3
1
1
1
1
+ See 10 more…
primary cell
epithelial cell of prostate
3
2
2
colon epithelial cell
3
3
luminal epithelial cell of prostatic duct
1
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