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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
accessible chromatin
59
target gene predictions
51
candidate regulatory elements
49
gene expression
33
differential activity
chromatin state
16
eQTL
13
binding sites
13
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
60
February, 2021
57
September, 2022
47
March, 2023
35
May, 2021
26
February, 2024
20
January, 2021
18
November, 2021
9
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
2
February, 2020
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
218
bed bed3+
77
tsv
57
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
325
Homo sapiens
Biosample type
134
primary cell
113
tissue
75
cell line
3
in vitro differentiated cells
Organ
896
epithelium
575
kidney
410
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
285
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
232
hg19
49
GRCh38
annotation_type!
chromatin state
BIOSAMPLE
TYPE
325 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 14 more…
tissue
islet of Langerhans
6
1
11
13
2
1
1
2
2
2
body of pancreas
5
8
2
1
1
3
pancreas
5
5
5
1
1
1
1
prostate gland
1
2
4
1
2
2
endocrine pancreas
4
7
+ See 8 more…
cell line
EndoC_BH1
8
1
8
3
1
22Rv1
2
4
1
1
LNCAP
1
1
2
1
1
PC-3
1
1
2
1
1
RWPE1
1
1
2
1
1
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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