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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
accessible chromatin
56
target gene predictions
51
candidate regulatory elements
47
gene expression
33
differential activity
30
chromatin state
16
eQTL
13
histone modifications
12
binding sites
12
variant allelic effects
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
83
September, 2022
60
February, 2021
47
March, 2023
35
May, 2021
26
February, 2024
20
January, 2021
18
November, 2021
9
June, 2020
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
218
bed bed3+
72
tsv
57
bigWig
26
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
346
Homo sapiens
Biosample type
136
primary cell
121
tissue
86
cell line
3
in vitro differentiated cells
Organ
943
epithelium
649
kidney
449
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
306
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
255
hg19
72
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
346 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 14 more…
tissue
islet of Langerhans
6
1
9
3
13
1
1
1
2
2
2
body of pancreas
5
8
2
4
1
1
pancreas
5
3
5
3
1
1
1
1
endocrine pancreas
4
7
4
prostate gland
1
2
4
2
1
2
2
+ See 8 more…
cell line
EndoC_BH1
8
8
3
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
1
2
1
1
1
RWPE1
1
1
2
1
1
1
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
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