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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
174
candidate regulatory elements
160
target gene predictions
90
chromatin state
41
accessible chromatin
19
binding sites
19
histone modifications
13
gene expression
3
eQTL
3
variant allelic effects
Date released
254
September, 2022
133
February, 2021
57
February, 2024
21
November, 2021
20
June, 2020
13
May, 2021
8
August, 2021
5
August, 2017
3
January, 2022
3
March, 2020
3
March, 2024
2
October, 2022
Available data
421
bed bed3+
85
bed bed9
21
bigWig
13
tsv
Organism
522
Homo sapiens
Biosample type
285
tissue
161
cell line
45
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
501
AMP
21
ENCODE
Genome assembly (visualization)
506
hg19
170
GRCh38
BIOSAMPLE
TYPE
522 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
chorionic villus
8
4
4
+ See 32 more…
cell line
H1-hESC
1
39
1
1
2
1
8
H9
7
8
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
+ See 22 more…
primary cell
trophoblast cell
7
5
4
1
1
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
+ See 6 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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