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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
186
candidate regulatory elements
121
target gene predictions
106
chromatin state
54
accessible chromatin
34
binding sites
25
gene expression
23
histone modifications
9
eQTL
6
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
307
September, 2022
133
February, 2021
31
February, 2024
20
November, 2021
15
June, 2020
11
March, 2020
10
August, 2021
9
May, 2021
8
October, 2022
5
August, 2017
4
March, 2023
3
April, 2020
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
May, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
428
bed bed3+
101
bed bed9
43
bigWig
29
tsv
3
csv
1
bam
1
bigBed bed9
Organism
572
Homo sapiens
Biosample type
259
tissue
160
cell line
143
primary cell
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
549
AMP
20
ENCODE
3
LungMap
Genome assembly (visualization)
538
hg19
171
GRCh38
2
hg18
BIOSAMPLE
TYPE
572 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
lung
33
17
16
1
1
left lung
26
13
13
liver
13
10
9
4
1
1
2
7
1
1
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
+ See 13 more…
cell line
A549
21
19
18
1
2
1
MCF-7
9
6
5
1
3
2
HepG2
2
3
2
2
3
5
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
+ See 10 more…
primary cell
hepatocyte
1
3
1
8
1
13
4
2
endothelial cell of hepatic sinusoid
6
6
4
fibroblast of lung
6
4
4
2
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
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