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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
target gene predictions
89
candidate regulatory elements
46
chromatin state
27
accessible chromatin
25
binding sites
16
histone modifications
10
gene expression
1
variant allelic effects
Date released
132
September, 2022
90
February, 2021
52
February, 2024
14
June, 2020
9
May, 2021
8
August, 2021
8
November, 2021
4
October, 2022
2
August, 2017
1
March, 2020
Available data
266
bed bed3+
44
bed bed9
13
bigWig
10
tsv
Organism
320
Homo sapiens
Biosample type
163
cell line
68
primary cell
55
tissue
33
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
312
AMP
8
ENCODE
Genome assembly (visualization)
310
hg19
111
GRCh38
BIOSAMPLE
TYPE
320 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
variant allelic effects
cell line
H1-hESC
39
1
1
1
2
1
8
MCF-7
6
9
5
1
3
2
H9
8
7
1
T47D
2
3
2
H7-hESC
2
1
1
1
1
+ See 17 more…
primary cell
trophoblast cell
5
7
4
1
1
mammary gland epithelial cell
4
3
3
1
1
1
mammary epithelial cell
1
3
1
1
4
fibroblast of mammary gland
1
2
1
1
2
1
myoepithelial cell of mammary gland
2
4
2
+ See 4 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
femur
1
2
1
arm bone
1
1
1
+ See 13 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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