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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
candidate regulatory elements
91
target gene predictions
accessible chromatin
54
chromatin state
51
gene expression
33
differential activity
23
binding sites
19
histone modifications
18
eQTL
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
148
September, 2022
100
February, 2021
47
March, 2023
30
May, 2021
12
November, 2021
11
February, 2024
10
January, 2021
10
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
4
August, 2017
4
May, 2020
4
October, 2022
3
March, 2024
2
February, 2020
2
January, 2020
1
April, 2019
1
February, 2023
1
January, 2018
Available data
254
bed bed3+
79
tsv
49
bed bed9
7
bigBed narrowPeak
7
bigWig
3
csv
2
bigBed bed9
Organism
412
Homo sapiens
Biosample type
182
primary cell
128
tissue
94
cell line
8
in vitro differentiated cells
Organ
737
epithelium
602
kidney
424
brain
372
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
388
AMP
12
ENCODE
10
T1D
2
community
Genome assembly (visualization)
315
hg19
72
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
412 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
4
2
keratinocyte
3
5
3
1
2
1
pancreatic ductal cell
3
3
3
1
2
1
fibroblast of dermis
4
4
3
1
+ See 24 more…
tissue
islet of Langerhans
1
3
11
2
1
13
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
pancreas
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
lower leg skin
6
2
2
+ See 9 more…
cell line
EndoC_BH1
1
8
3
1
GM23248
2
1
1
1
1
Panc1
2
2
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
+ See 21 more…
in vitro differentiated cells
pancreatic ductal cell
3
foreskin keratinocyte
1
1
iPS DF 4.7 Cell Line
1
1
dermis microvascular lymphatic vessel endothelial cell
1
See all biosamples
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