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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
candidate regulatory elements
110
target gene predictions
96
accessible chromatin
75
chromatin state
42
binding sites
34
histone modifications
16
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
198
September, 2022
139
February, 2021
58
November, 2021
24
June, 2020
17
February, 2024
15
May, 2021
13
October, 2022
9
January, 2020
9
March, 2020
9
May, 2020
8
August, 2017
8
August, 2021
7
November, 2022
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
450
bed bed3+
67
bed bed9
59
bigWig
8
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
534
Homo sapiens
Biosample type
296
primary cell
92
tissue
89
cell line
56
in vitro differentiated cells
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
467
AMP
58
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
534
hg19
159
GRCh38
2
hg18
BIOSAMPLE
TYPE
534 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
4
16
1
6
pericyte cell
1
10
10
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
2
3
1
2
1
fibroblast of lung
6
4
4
2
+ See 40 more…
tissue
adipose tissue
7
8
2
6
1
1
3
omental fat pad
5
2
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
lower leg skin
6
2
2
subcutaneous abdominal adipose tissue
5
1
+ See 9 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
fibroblast of cardiac tissue
2
1
2
iPS DF 19.11
2
2
1
+ See 24 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
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