Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
134
candidate regulatory elements
80
target gene predictions
22
accessible chromatin
21
binding sites
18
histone modifications
1
chromatin state
1
variant allelic effects
Date released
134
September, 2022
101
February, 2021
14
June, 2020
13
November, 2021
8
May, 2021
5
October, 2022
1
August, 2017
1
February, 2024
Available data
277
bed bed3+
67
bed bed9
8
bigWig
2
tsv
Organism
277
Homo sapiens
Biosample type
115
primary cell
91
tissue
58
cell line
13
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
264
AMP
13
ENCODE
Genome assembly (visualization)
277
hg19
13
GRCh38
BIOSAMPLE
TYPE
277 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
variant allelic effects
primary cell
foreskin fibroblast
6
2
1
4
2
foreskin keratinocyte
11
4
keratinocyte
3
5
2
1
2
1
1
trophoblast cell
7
5
1
1
fibroblast of dermis
4
4
1
+ See 18 more…
tissue
placenta
26
15
1
1
2
chorionic villus
8
4
lower leg skin
6
2
chorion membrane
3
3
1
umbilical cord
2
1
1
1
+ See 6 more…
cell line
GM23248
2
1
1
1
1
RPMI7951
2
1
1
SK-MEL-5
2
1
1
iPS DF 19.11
2
2
keratinocyte
3
1
+ See 16 more…
in vitro differentiated cells
trophoblast cell
2
2
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download