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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
candidate regulatory elements
120
target gene predictions
75
chromatin state
72
accessible chromatin
52
gene expression
42
binding sites
35
histone modifications
25
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
198
September, 2022
162
February, 2021
58
November, 2021
28
May, 2021
June, 2020
19
February, 2024
17
September, 2023
13
October, 2022
11
August, 2021
10
January, 2020
10
January, 2022
10
May, 2020
9
February, 2020
9
March, 2020
8
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
438
bed bed3+
68
tsv
67
bed bed9
59
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
601
Homo sapiens
Biosample type
333
primary cell
123
tissue
92
cell line
52
in vitro differentiated cells
1
stem cell
Organ
924
epithelium
637
kidney
445
brain
440
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
517
AMP
58
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
521
hg19
160
GRCh38
2
hg18
month_released!
June, 2020
BIOSAMPLE
TYPE
601 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
fibroblast of lung
6
4
4
2
+ See 51 more…
tissue
adipose tissue
7
8
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
lower leg skin
6
2
2
skin of body
1
1
1
3
+ See 15 more…
cell line
pituitary stalk
10
GM23248
2
1
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
HT1080
2
1
1
+ See 22 more…
in vitro differentiated cells
adipocyte
4
6
6
3
1
1
1
mesenchymal stem cell
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
foreskin keratinocyte
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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