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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
50
candidate regulatory elements
28
target gene predictions
23
chromatin state
11
binding sites
8
histone modifications
accessible chromatin
3
eQTL
Date released
69
September, 2022
42
February, 2021
4
May, 2021
4
October, 2022
3
January, 2022
1
November, 2021
Available data
97
bed bed3+
23
bed bed9
tsv
Organism
123
Homo sapiens
Biosample type
62
cell line
36
primary cell
23
tissue
2
in vitro differentiated cells
Organ
epithelium
357
brain
351
kidney
334
musculature of body
307
connective tissue
295
lung
265
intestine
207
limb
205
bodily fluid
200
heart
194
blood
193
embryo
189
skin of body
166
vasculature
162
large intestine
137
extraembryonic component
136
pancreas
131
blood vessel
109
stomach
104
liver
81
small intestine
80
mammary gland
78
uterus
72
prostate gland
70
bone element
69
placenta
65
adrenal gland
61
penis
60
adipose tissue
60
ureter
54
lymph node
48
artery
48
eye
47
thymus
43
gonad
39
esophagus
36
spinal cord
31
spleen
23
testis
21
lymphoid tissue
20
ovary
20
thyroid gland
20
vein
17
mouth
16
nerve
13
bronchus
12
lymphatic vessel
12
pituitary gland
11
bone marrow
11
breast
10
skeleton
9
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
122
AMP
1
ENCODE
Genome assembly (visualization)
120
hg19
27
GRCh38
organ_slims!
epithelium
annotation_type!
accessible chromatin
files.file_type!
tsv
BIOSAMPLE
TYPE
123 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
cell line
GM23248
2
1
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
RPMI7951
2
1
1
iPS DF 19.7
2
1
1
+ See 13 more…
primary cell
foreskin fibroblast
6
2
1
4
2
fibroblast of dermis
4
4
3
1
skin fibroblast
2
3
2
fibroblast of arm
1
fibroblast of skin of abdomen
1
tissue
lower leg skin
6
2
2
skin of body
1
1
1
3
suprapubic skin
3
skin of forearm
1
1
skin of prepuce of penis
1
1
in vitro differentiated cells
iPS DF 4.7 Cell Line
1
1
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