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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
74
candidate regulatory elements
48
target gene predictions
40
chromatin state
23
accessible chromatin
19
gene expression
18
eQTL
14
binding sites
11
histone modifications
6
differential activity
5
Fine-mapped variants
4
variant allelic effects
2
sQTL
2
variant to gene
Date released
109
September, 2022
65
February, 2021
13
March, 2023
12
May, 2021
9
June, 2020
8
August, 2021
8
March, 2020
7
January, 2022
5
May, 2020
4
February, 2024
4
January, 2020
4
October, 2022
3
August, 2017
3
November, 2021
2
February, 2020
2
January, 2021
2
March, 2024
1
April, 2019
1
August, 2018
1
January, 2018
1
June, 2021
1
November, 2019
1
October, 2019
Available data
180
bed bed3+
36
bed bed9
28
tsv
13
bigWig
2
bigBed bed9
1
bigBed narrowPeak
Organism
266
Homo sapiens
Biosample type
132
tissue
75
cell line
55
primary cell
4
in vitro differentiated cells
Organ
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
261
AMP
3
ENCODE
2
T1D
Genome assembly (visualization)
228
hg19
59
GRCh38
organ_slims!
epithelium
BIOSAMPLE
TYPE
266 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
binding sites
histone modifications
differential activity
Fine-mapped variants
variant allelic effects
sQTL
variant to gene
tissue
islet of Langerhans
1
3
6
11
13
2
1
2
1
2
2
body of pancreas
8
5
4
2
1
3
1
pancreas
5
5
3
5
1
1
1
1
endocrine pancreas
7
4
4
lower leg skin
6
2
2
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
Panc1
2
2
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
+ See 16 more…
primary cell
foreskin fibroblast
6
2
1
1
4
2
fibroblast of dermis
4
4
3
1
skin fibroblast
2
3
2
2
pancreatic stellate cell
1
2
2
3
pancreatic quiescent stellate cell
3
+ See 6 more…
in vitro differentiated cells
iPS DF 4.7 Cell Line
1
1
1
skin fibroblast
1
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