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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
229
candidate regulatory elements
175
target gene predictions
132
chromatin state
85
histone modifications
79
binding sites
67
accessible chromatin
36
Fine-mapped variants
34
eQTL
22
gene expression
18
variant allelic effects
Date released
351
September, 2022
248
February, 2021
41
June, 2020
38
March, 2020
30
February, 2024
29
January, 2020
29
October, 2022
21
January, 2022
20
May, 2021
19
May, 2020
18
February, 2020
10
November, 2021
9
August, 2017
4
March, 2024
4
May, 2019
3
September, 2023
2
August, 2021
1
November, 2019
Available data
655
bed bed3+
123
bed bed9
70
tsv
26
bigWig
6
bigBed bed9
Organism
876
Homo sapiens
Biosample type
377
tissue
342
cell line
144
primary cell
13
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
867
AMP
10
ENCODE
Genome assembly (visualization)
828
hg19
250
GRCh38
BIOSAMPLE
TYPE
877 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
accessible chromatin
Fine-mapped variants
eQTL
gene expression
variant allelic effects
tissue
brain
29
16
18
3
1
2
2
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 65 more…
cell line
K562
7
23
7
1
2
1
GM12878
2
8
2
1
2
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 57 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
foreskin fibroblast
6
2
1
2
4
1
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 19 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
+ See 2 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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