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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
243
candidate regulatory elements
204
target gene predictions
135
chromatin state
72
histone modifications
67
accessible chromatin
47
binding sites
36
Fine-mapped variants
32
eQTL
31
gene expression
18
variant allelic effects
Date released
363
September, 2022
231
February, 2021
53
February, 2024
39
June, 2020
39
March, 2020
29
January, 2020
23
May, 2021
21
January, 2022
19
May, 2020
18
February, 2020
12
November, 2021
11
October, 2022
8
August, 2017
8
August, 2021
4
May, 2019
3
March, 2024
3
September, 2023
1
November, 2019
Available data
652
bed bed3+
127
bed bed9
79
tsv
28
bigWig
6
bigBed bed9
Organism
884
Homo sapiens
Biosample type
409
tissue
274
cell line
157
primary cell
43
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
873
AMP
12
ENCODE
Genome assembly (visualization)
827
hg19
279
GRCh38
BIOSAMPLE
TYPE
885 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
binding sites
Fine-mapped variants
eQTL
gene expression
variant allelic effects
tissue
brain
29
16
18
3
2
1
2
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
chorionic villus
8
4
4
+ See 69 more…
cell line
H1-hESC
1
39
1
1
1
2
8
H9
7
8
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 48 more…
primary cell
foreskin keratinocyte
11
4
4
trophoblast cell
7
5
4
1
1
keratinocyte
3
5
3
2
2
1
1
foreskin fibroblast
6
2
1
2
1
4
fibroblast of dermis
4
4
3
1
+ See 21 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 10 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
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