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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
137
candidate regulatory elements
109
target gene predictions
95
accessible chromatin
74
chromatin state
51
gene expression
40
binding sites
32
histone modifications
24
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
195
September, 2022
157
February, 2021
58
November, 2021
23
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
January, 2022
9
March, 2020
8
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
443
bed bed3+
67
tsv
66
bed bed9
59
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
603
Homo sapiens
Biosample type
336
primary cell
120
tissue
89
cell line
57
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
519
AMP
58
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
525
hg19
158
GRCh38
2
hg18
organ_slims!
embryo
mammary gland
BIOSAMPLE
TYPE
603 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
2
3
1
2
1
osteoblast
2
2
5
1
2
3
2
+ See 51 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
lower leg skin
6
2
2
skin of body
1
1
1
3
+ See 13 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
fibroblast of cardiac tissue
2
1
2
iPS DF 19.11
2
2
1
+ See 24 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
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