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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
candidate regulatory elements
88
target gene predictions
71
chromatin state
24
binding sites
23
accessible chromatin
18
histone modifications
1
variant allelic effects
Date released
200
September, 2022
114
February, 2021
16
November, 2021
15
June, 2020
10
May, 2021
5
October, 2022
4
August, 2017
4
February, 2024
1
March, 2020
Available data
302
bed bed3+
67
bed bed9
8
bigWig
Organism
369
Homo sapiens
Biosample type
150
tissue
106
primary cell
104
cell line
9
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
353
AMP
16
ENCODE
Genome assembly (visualization)
369
hg19
90
GRCh38
BIOSAMPLE
TYPE
369 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
lower leg skin
6
2
2
+ See 9 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
1
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 9 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RPMI7951
2
1
1
1
+ See 23 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
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