Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
163
candidate regulatory elements
101
target gene predictions
81
chromatin state
30
accessible chromatin
26
binding sites
19
histone modifications
18
eQTL
17
gene expression
6
Fine-mapped variants
4
variant allelic effects
2
differential activity
Date released
224
September, 2022
137
February, 2021
16
June, 2020
16
November, 2021
13
May, 2021
9
March, 2020
8
January, 2022
6
August, 2017
6
August, 2021
6
February, 2024
5
February, 2020
5
October, 2022
4
January, 2020
4
March, 2024
3
May, 2020
2
September, 2018
1
January, 2018
1
November, 2022
Available data
351
bed bed3+
75
bed bed9
26
tsv
13
bigWig
1
bigBed bed9
Organism
467
Homo sapiens
Biosample type
243
tissue
107
cell line
107
primary cell
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
451
AMP
16
ENCODE
Genome assembly (visualization)
438
hg19
113
GRCh38
2
hg18
BIOSAMPLE
TYPE
467 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
differential activity
tissue
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
1
4
3
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
2
6
5
3
1
1
transverse colon
8
5
4
1
1
+ See 22 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RPMI7951
2
1
1
1
+ See 25 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
foreskin fibroblast
6
2
1
1
4
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 10 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
white adipose cell
1
See all biosamples
Download