Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
227
candidate regulatory elements
131
target gene predictions
114
chromatin state
39
binding sites
36
accessible chromatin
21
histone modifications
4
eQTL
3
gene expression
2
variant allelic effects
Date released
336
September, 2022
165
February, 2021
22
June, 2020
19
November, 2021
10
May, 2021
10
October, 2022
4
January, 2022
3
April, 2020
3
March, 2024
2
August, 2017
2
February, 2024
1
March, 2020
Available data
458
bed bed3+
112
bed bed9
14
bigWig
3
tsv
Organism
577
Homo sapiens
Biosample type
228
cell line
206
tissue
134
primary cell
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
555
AMP
19
ENCODE
3
LungMap
Genome assembly (visualization)
570
hg19
135
GRCh38
BIOSAMPLE
TYPE
577 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
cell line
A549
21
19
18
2
1
1
IMR-90
2
2
1
2
1
1
GM12864
2
1
1
2
1
1
GM12865
2
1
1
2
1
1
MM.1S
2
2
1
1
1
1
+ See 38 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
lower leg skin
6
2
2
+ See 6 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
4
1
2
fibroblast of dermis
4
4
3
1
+ See 14 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download