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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
122
candidate regulatory elements
76
target gene predictions
60
chromatin state
32
binding sites
27
accessible chromatin
19
histone modifications
16
eQTL
15
gene expression
6
Fine-mapped variants
5
variant allelic effects
2
differential activity
Date released
168
September, 2022
119
February, 2021
16
November, 2021
13
June, 2020
10
May, 2021
8
March, 2020
7
October, 2022
6
August, 2021
6
January, 2022
5
February, 2020
4
August, 2017
4
February, 2024
4
January, 2020
3
May, 2020
2
March, 2024
2
September, 2018
1
January, 2018
1
November, 2022
Available data
287
bed bed3+
56
bed bed9
24
tsv
13
bigWig
1
bigBed bed9
Organism
380
Homo sapiens
Biosample type
147
primary cell
111
tissue
109
cell line
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
364
AMP
16
ENCODE
Genome assembly (visualization)
355
hg19
90
GRCh38
2
hg18
BIOSAMPLE
TYPE
380 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
differential activity
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
1
2
mammary gland epithelial cell
3
4
3
1
1
1
fibroblast of dermis
4
4
3
1
+ See 14 more…
tissue
adipose tissue
7
8
6
1
2
4
3
1
subcutaneous adipose tissue
2
1
2
6
5
3
1
1
omental fat pad
5
2
2
2
2
2
3
lower leg skin
6
2
2
skin of body
1
1
1
3
+ See 11 more…
cell line
MCF-7
9
6
5
3
1
2
GM23248
2
1
1
1
1
1
T47D
3
2
2
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
+ See 20 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
+ See 1 more…
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