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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
104
candidate regulatory elements
68
target gene predictions
56
chromatin state
40
accessible chromatin
31
binding sites
28
gene expression
27
histone modifications
13
eQTL
7
variant allelic effects
6
Fine-mapped variants
4
differential activity
1
caQTL
Date released
157
September, 2022
97
February, 2021
30
February, 2024
15
November, 2021
14
June, 2020
13
March, 2020
10
August, 2021
8
May, 2021
6
May, 2020
5
February, 2020
5
January, 2022
5
October, 2022
4
August, 2017
4
January, 2020
4
March, 2023
2
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
1
September, 2018
Available data
280
bed bed3+
52
bed bed9
36
tsv
30
bigWig
3
csv
2
bigBed bed9
1
bam
Organism
385
Homo sapiens
Biosample type
163
primary cell
108
tissue
98
cell line
16
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
370
AMP
15
ENCODE
Genome assembly (visualization)
345
hg19
118
GRCh38
2
hg18
BIOSAMPLE
TYPE
385 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
primary cell
hepatocyte
1
3
1
8
1
13
4
2
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
endothelial cell of hepatic sinusoid
6
6
4
foreskin fibroblast
6
2
1
1
4
2
+ See 13 more…
tissue
liver
13
10
9
4
1
1
2
7
1
1
tibial nerve
6
3
4
3
2
2
2
3
lower leg skin
6
2
2
right lobe of liver
2
1
1
1
1
3
skin of body
1
1
1
3
+ See 5 more…
cell line
HepG2
2
3
2
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
+ See 19 more…
in vitro differentiated cells
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 1 more…
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