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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
140
candidate regulatory elements
134
target gene predictions
67
chromatin state
31
binding sites
27
accessible chromatin
24
histone modifications
2
variant allelic effects
Date released
195
September, 2022
125
February, 2021
53
February, 2024
19
June, 2020
14
November, 2021
11
May, 2021
5
October, 2022
2
August, 2017
1
March, 2020
Available data
360
bed bed3+
65
bed bed9
8
bigWig
Organism
425
Homo sapiens
Biosample type
189
cell line
125
primary cell
73
tissue
37
in vitro differentiated cells
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
411
AMP
14
ENCODE
Genome assembly (visualization)
425
hg19
134
GRCh38
BIOSAMPLE
TYPE
425 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
cell line
H1-hESC
1
39
1
2
1
1
H9
7
8
1
GM23248
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 34 more…
primary cell
foreskin keratinocyte
11
4
4
trophoblast cell
7
5
4
1
1
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
1
2
fibroblast of dermis
4
4
3
1
+ See 13 more…
tissue
thyroid gland
8
5
4
1
chorionic villus
8
4
4
trophoblast
4
3
2
1
1
lower leg skin
6
2
2
embryonic facial prominence
1
1
1
1
+ See 7 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 5 more…
stem cell
H1-hESC
1
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