Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
145
candidate regulatory elements
114
target gene predictions
98
accessible chromatin
80
chromatin state
52
gene expression
45
binding sites
35
histone modifications
22
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
204
September, 2022
168
February, 2021
58
November, 2021
25
June, 2020
19
February, 2024
19
May, 2021
17
September, 2023
14
October, 2022
12
January, 2020
12
May, 2020
11
August, 2021
10
March, 2020
9
August, 2017
9
February, 2020
9
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
468
bed bed3+
71
bed bed9
66
tsv
60
bigWig
7
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
633
Homo sapiens
Biosample type
362
primary cell
121
tissue
91
cell line
58
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
551
AMP
58
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
555
hg19
164
GRCh38
2
hg18
BIOSAMPLE
TYPE
633 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
2
3
1
2
1
+ See 52 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
lower leg skin
6
2
2
skin of body
1
1
1
3
+ See 14 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
fibroblast of cardiac tissue
2
1
2
iPS DF 19.11
2
2
1
+ See 25 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download