Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
148
candidate regulatory elements
99
target gene predictions
92
chromatin state
48
histone modifications
45
accessible chromatin
36
Fine-mapped variants
30
eQTL
19
gene expression
17
variant allelic effects
16
binding sites
Date released
79
September, 2022
12
May, 2021
10
January, 2020
6
February, 2020
3
March, 2020
3
September, 2023
2
November, 2021
1
February, 2021
1
February, 2024
1
March, 2024
Available data
99
bed bed3+
19
tsv
Organism
118
Homo sapiens
Biosample type
86
tissue
22
cell line
6
primary cell
3
in vitro differentiated cells
1
stem cell
Organ
375
epithelium
277
kidney
127
connective tissue
95
brain
94
embryo
92
pancreas
91
musculature of body
79
lung
76
intestine
70
heart
67
vasculature
60
uterus
58
bodily fluid
56
blood
54
limb
50
blood vessel
46
large intestine
46
skin of body
45
liver
36
extraembryonic component
32
stomach
26
adipose tissue
23
small intestine
22
adrenal gland
20
bone element
19
mammary gland
17
placenta
16
artery
16
prostate gland
14
thymus
13
gonad
13
ureter
12
esophagus
11
penis
11
pituitary gland
10
eye
10
spinal cord
9
lymph node
9
spleen
8
ovary
7
lymphoid tissue
7
thyroid gland
6
lymphatic vessel
5
mouth
5
nerve
5
testis
5
vein
4
breast
4
urinary bladder
3
bone marrow
3
bronchus
3
skeleton
3
tongue
3
vagina
1
nose
1
pericardium
Project
116
AMP
2
ENCODE
Genome assembly (visualization)
99
hg19
2
GRCh38
BIOSAMPLE
TYPE
118 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
gene expression
tissue
brain
16
1
small intestine
17
caudate nucleus
3
1
cerebellum
2
2
frontal cortex
2
2
+ See 25 more…
cell line
pituitary stalk
10
SK-N-SH
3
SK-N-DZ
2
A172
1
BE(2)-C
1
+ See 5 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
enterocyte of epithelium of small intestine
1
+ See 1 more…
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download