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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
candidate regulatory elements
60
accessible chromatin
46
target gene predictions
44
chromatin state
18
binding sites
9
histone modifications
3
variant allelic effects
2
eQTL
1
gene expression
Date released
126
September, 2022
63
February, 2021
24
February, 2023
22
November, 2022
11
June, 2020
5
October, 2022
3
May, 2021
2
August, 2017
2
February, 2020
2
February, 2024
2
January, 2020
2
May, 2020
1
January, 2022
1
March, 2020
Available data
221
bed bed3+
42
bed bed9
32
bigWig
2
tsv
Organism
266
Homo sapiens
Biosample type
152
tissue
59
primary cell
46
cell line
9
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
266
AMP
14
ENCODE
Genome assembly (visualization)
263
hg19
46
GRCh38
BIOSAMPLE
TYPE
266 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
gene expression
tissue
small intestine
29
1
17
15
1
retina
6
23
3
3
1
1
1
1
1
pigmented layer of retina
20
duodenal mucosa
4
2
3
eye
4
1
2
2
+ See 3 more…
primary cell
mammary gland epithelial cell
3
3
3
1
1
mammary epithelial cell
3
1
1
1
4
retinal pigment epithelial cell
2
2
1
1
2
1
fibroblast of mammary gland
2
1
1
1
2
1
myoepithelial cell of mammary gland
4
2
2
+ See 4 more…
cell line
MCF-7
9
1
6
5
3
2
WERI-Rb-1
2
1
1
1
2
1
T47D
3
2
2
MCF 10A
3
fibroblast of the conjunctiva
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
mammary gland epithelial cell
1
1
1
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