Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
52
target gene predictions
49
gene expression
46
accessible chromatin
41
chromatin state
31
differential activity
17
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
113
September, 2022
53
February, 2021
45
March, 2023
34
May, 2021
25
February, 2024
10
March, 2020
8
August, 2021
7
August, 2018
6
January, 2022
6
June, 2020
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
194
bed bed3+
77
tsv
36
bed bed9
36
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
336
Homo sapiens
Biosample type
205
tissue
92
primary cell
36
cell line
3
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
336
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
244
hg19
68
GRCh38
BIOSAMPLE
TYPE
336 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
differential activity
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
small intestine
29
17
1
15
1
islet of Langerhans
1
11
6
3
13
1
1
2
2
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
+ See 11 more…
primary cell
pancreatic ductal cell
1
3
3
3
1
2
1
pancreatic beta cell
1
3
4
3
1
pancreatic alpha cell
1
3
3
3
1
pancreatic acinar cell
1
3
2
3
1
pancreatic delta cell
1
3
2
3
1
+ See 12 more…
cell line
EndoC_BH1
1
8
8
1
1
Panc1
2
2
1
ACC112
2
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download