Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
56
candidate regulatory elements
34
target gene predictions
30
chromatin state
14
eQTL
13
gene expression
8
accessible chromatin
6
Fine-mapped variants
3
variant allelic effects
2
binding sites
2
differential activity
1
histone modifications
Date released
81
September, 2022
41
February, 2021
9
March, 2020
6
August, 2021
5
February, 2020
4
January, 2020
4
January, 2022
4
May, 2021
3
August, 2017
3
May, 2020
2
February, 2024
2
June, 2020
2
September, 2018
1
January, 2018
1
November, 2022
Available data
109
bed bed3+
27
bed bed9
22
tsv
5
bigWig
1
bigBed bed9
Organism
169
Homo sapiens
Biosample type
164
tissue
3
cell line
1
in vitro differentiated cells
1
primary cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
169
AMP
4
ENCODE
Genome assembly (visualization)
148
hg19
43
GRCh38
2
hg18
BIOSAMPLE
TYPE
169 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
eQTL
gene expression
accessible chromatin
Fine-mapped variants
variant allelic effects
binding sites
differential activity
histone modifications
tissue
small intestine
29
17
15
1
1
adipose tissue
7
8
6
4
3
2
1
1
subcutaneous adipose tissue
2
1
6
5
2
3
1
1
omental fat pad
5
2
2
2
2
2
3
duodenal mucosa
4
2
3
+ See 6 more…
cell line
adipose tissue derived mesenchymal stem cell
1
1
adipose-derived mesenchymal stem cell
1
in vitro differentiated cells
white adipose cell
1
primary cell
mesenchymal stem cell of adipose
1
See all biosamples
Download