Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
126
candidate regulatory elements
81
chromatin state
79
target gene predictions
34
gene expression
28
accessible chromatin
20
eQTL
15
Fine-mapped variants
13
variant allelic effects
7
binding sites
7
histone modifications
2
caQTL
2
differential activity
Date released
189
September, 2022
89
February, 2021
24
March, 2020
16
February, 2020
16
January, 2020
14
August, 2021
14
May, 2020
8
May, 2021
7
February, 2024
7
January, 2022
7
June, 2020
6
April, 2019
3
August, 2017
3
February, 2023
3
November, 2019
2
October, 2019
2
September, 2018
1
January, 2018
1
May, 2019
1
November, 2022
Available data
272
bed bed3+
73
bed bed9
51
tsv
21
bigWig
11
bigBed bed9
Organism
414
Homo sapiens
Biosample type
378
tissue
22
primary cell
12
cell line
2
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
414
AMP
14
ENCODE
Genome assembly (visualization)
367
hg19
126
GRCh38
2
hg18
BIOSAMPLE
TYPE
414 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
gene expression
accessible chromatin
eQTL
Fine-mapped variants
variant allelic effects
binding sites
histone modifications
caQTL
differential activity
tissue
heart
37
21
20
3
5
2
1
1
small intestine
29
15
17
1
1
heart left ventricle
11
8
7
1
3
1
2
1
adipose tissue
7
6
8
3
2
4
1
1
coronary artery
3
3
3
1
3
2
3
2
1
+ See 20 more…
primary cell
fibroblast of cardiac tissue
3
3
3
cardiac fibroblast
3
smooth muscle cell of the coronary artery
1
1
1
cardiac muscle myoblast
1
1
endothelial cell of coronary artery
1
1
+ See 3 more…
cell line
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
adipose-derived mesenchymal stem cell
1
in vitro differentiated cells
cardiac fibroblast
1
white adipose cell
1
See all biosamples
Download