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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
110
target gene predictions
96
candidate regulatory elements
50
chromatin state
17
accessible chromatin
15
binding sites
13
histone modifications
10
gene expression
1
eQTL
Date released
141
September, 2022
76
February, 2021
51
February, 2024
11
June, 2020
8
August, 2021
8
May, 2021
7
November, 2021
2
August, 2017
2
January, 2021
2
March, 2020
1
January, 2022
1
May, 2020
1
May, 2022
1
October, 2022
Available data
253
bed bed3+
47
bed bed9
10
tsv
6
bigWig
1
bed bed9+
Organism
312
Homo sapiens
Biosample type
127
cell line
115
tissue
39
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
303
AMP
7
ENCODE
2
T1D
Genome assembly (visualization)
301
hg19
106
GRCh38
BIOSAMPLE
TYPE
312 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
cell line
H1-hESC
39
1
1
1
2
1
8
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 14 more…
tissue
small intestine
17
29
15
1
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
duodenal mucosa
2
4
3
muscle layer of duodenum
2
4
2
+ See 4 more…
primary cell
trophoblast cell
5
7
4
1
1
megakaryocyte
2
2
stromal cell of bone marrow
1
2
1
mononuclear cell of bone marrow
2
1
enterocyte of epithelium of small intestine
1
1
+ See 6 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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