Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
80
candidate regulatory elements
77
accessible chromatin
48
target gene predictions
44
chromatin state
14
binding sites
10
histone modifications
5
gene expression
2
eQTL
2
variant allelic effects
Date released
126
September, 2022
71
February, 2021
24
February, 2023
22
November, 2022
12
June, 2020
9
November, 2021
3
May, 2020
3
October, 2022
2
February, 2020
2
January, 2020
2
January, 2021
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
1
May, 2021
1
May, 2022
Available data
232
bed bed3+
48
bigWig
42
bed bed9
6
tsv
1
bed bed9+
Organism
282
Homo sapiens
Biosample type
172
tissue
63
cell line
41
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
271
AMP
9
ENCODE
2
T1D
Genome assembly (visualization)
275
hg19
63
GRCh38
BIOSAMPLE
TYPE
282 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
small intestine
29
1
17
15
1
retina
6
23
3
3
1
1
1
1
1
pigmented layer of retina
20
duodenal mucosa
4
2
3
eye
4
1
2
2
+ See 14 more…
cell line
WERI-Rb-1
2
1
1
1
2
1
MG63
2
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
L1-S8
2
1
1
1
+ See 9 more…
primary cell
retinal pigment epithelial cell
2
3
1
1
2
1
iris pigment epithelial cell
2
1
1
1
fibroblast of the conjunctiva
2
1
1
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
See all biosamples
Download