Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
204
candidate regulatory elements
161
target gene predictions
130
chromatin state
128
accessible chromatin
67
gene expression
43
binding sites
35
histone modifications
28
eQTL
26
variant allelic effects
15
Fine-mapped variants
14
differential activity
4
caQTL
2
pQTL
Date released
315
September, 2022
200
February, 2021
62
November, 2021
29
June, 2020
25
March, 2020
23
February, 2024
22
January, 2020
22
May, 2020
20
May, 2021
19
August, 2021
18
February, 2020
17
September, 2023
13
October, 2022
10
January, 2022
8
August, 2017
7
March, 2023
7
November, 2022
6
April, 2019
4
February, 2023
4
January, 2021
4
May, 2022
4
October, 2019
3
April, 2020
3
November, 2019
3
November, 2020
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
617
bed bed3+
116
bed bed9
93
tsv
87
bigWig
12
bigBed bed9
7
txt
1
bed bed9+
1
bigBed narrowPeak
Organism
857
Homo sapiens
Biosample type
407
tissue
311
primary cell
88
cell line
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
767
AMP
62
ENCODE
15
KPMP
4
ITG
4
T1D
3
LungMap
2
community
Genome assembly (visualization)
760
hg19
255
GRCh38
2
hg18
BIOSAMPLE
TYPE
857 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
pQTL
tissue
heart
37
20
21
5
3
1
1
2
small intestine
29
17
15
1
1
heart left ventricle
11
7
8
3
1
1
1
2
adipose tissue
7
8
6
2
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
+ See 34 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 57 more…
cell line
GM23248
2
1
1
1
1
1
MG63
2
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
L1-S8
2
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download