Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
candidate regulatory elements
47
target gene predictions
39
chromatin state
15
accessible chromatin
14
binding sites
6
histone modifications
4
gene expression
2
differential activity
1
eQTL
1
variant allelic effects
Date released
111
September, 2022
53
February, 2021
13
November, 2021
7
June, 2020
5
September, 2023
3
May, 2021
3
October, 2022
2
August, 2017
1
April, 2020
1
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
158
bed bed3+
37
bed bed9
8
bigWig
6
tsv
Organism
202
Homo sapiens
Biosample type
92
tissue
67
primary cell
38
cell line
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
183
AMP
13
ENCODE
5
KPMP
1
LungMap
Genome assembly (visualization)
195
hg19
51
GRCh38
BIOSAMPLE
TYPE
202 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
differential activity
eQTL
variant allelic effects
tissue
small intestine
29
17
15
1
1
duodenal mucosa
4
2
3
tongue
4
2
2
1
muscle layer of duodenum
4
2
2
mammary gland
1
1
+ See 1 more…
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
fibroblast of mammary gland
2
1
1
1
2
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
+ See 6 more…
cell line
MCF-7
9
6
5
1
3
2
T47D
3
2
2
MCF 10A
3
dermis lymphatic vessel endothelial cell
1
1
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download