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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
342
candidate regulatory elements
213
gene expression
178
target gene predictions
171
chromatin state
80
accessible chromatin
57
differential activity
23
variant allelic effects
14
binding sites
13
histone modifications
12
eQTL
6
Fine-mapped variants
2
caQTL
Date released
486
September, 2022
298
February, 2021
140
September, 2023
29
August, 2021
24
May, 2020
22
June, 2020
19
January, 2020
18
November, 2021
16
February, 2024
15
February, 2020
13
March, 2020
7
May, 2021
5
October, 2022
4
August, 2017
4
March, 2024
3
January, 2022
3
May, 2019
3
May, 2022
1
April, 2019
1
October, 2019
Available data
654
bed bed3+
265
tsv
167
bed bed9
87
txt
54
bigWig
5
bigBed bed9
Organism
1111
Homo sapiens
Biosample type
687
tissue
363
primary cell
58
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
953
AMP
140
KPMP
18
ENCODE
Genome assembly (visualization)
837
hg19
225
GRCh38
BIOSAMPLE
TYPE
1111 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
tissue
kidney
29
7
14
16
10
1
1
2
1
muscle of arm
33
16
16
1
1
small intestine
29
17
15
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
+ See 41 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
skeletal muscle satellite cell
2
2
2
2
5
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
+ See 74 more…
cell line
HEK293
3
1
1
1
2
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 10 more…
in vitro differentiated cells
myotube
1
1
renal cell carcinoma
1
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