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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
candidate regulatory elements
58
target gene predictions
50
chromatin state
38
accessible chromatin
24
gene expression
20
binding sites
19
histone modifications
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
142
September, 2022
81
February, 2021
29
February, 2024
11
March, 2020
10
August, 2021
9
June, 2020
9
November, 2021
5
May, 2021
4
August, 2017
4
March, 2023
3
January, 2020
3
May, 2020
3
October, 2022
2
February, 2020
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
234
bed bed3+
46
bed bed9
33
bigWig
28
tsv
3
csv
1
bam
1
bigBed bed9
Organism
322
Homo sapiens
Biosample type
158
tissue
108
primary cell
43
cell line
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
313
AMP
9
ENCODE
Genome assembly (visualization)
289
hg19
105
GRCh38
2
hg18
BIOSAMPLE
TYPE
322 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
small intestine
29
17
15
1
1
liver
13
10
9
4
1
1
2
7
1
1
duodenal mucosa
4
2
3
right lobe of liver
2
1
1
1
1
3
muscle layer of duodenum
4
2
2
+ See 12 more…
primary cell
hepatocyte
1
3
1
8
13
1
4
2
foreskin keratinocyte
11
4
4
endothelial cell of hepatic sinusoid
6
4
6
foreskin fibroblast
6
2
1
1
4
2
hepatic stellate cell
1
1
1
3
1
1
1
+ See 5 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
EH
2
1
1
EL
2
1
1
ELR
2
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
hepatocyte(AFP)
3
See all biosamples
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