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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
261
gene expression
224
accessible chromatin
147
target gene predictions
138
candidate regulatory elements
93
differential activity
79
chromatin state
49
binding sites
47
variant allelic effects
31
histone modifications
Fine-mapped variants
11
eQTL
5
caQTL
Date released
224
February, 2021
211
September, 2022
155
September, 2023
127
November, 2021
77
February, 2024
38
March, 2023
37
May, 2021
29
June, 2020
24
August, 2021
22
January, 2020
22
May, 2020
20
January, 2021
16
February, 2023
15
November, 2022
14
February, 2020
8
March, 2020
8
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
4
January, 2022
4
November, 2019
3
August, 2017
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
640
bed bed3+
336
tsv
185
bigWig
78
txt
76
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1085
Homo sapiens
Biosample type
840
primary cell
169
tissue
50
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
454
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
774
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
720
hg19
279
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
1085 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 151 more…
tissue
spinal cord
1
8
14
7
1
pigmented layer of retina
20
coronary artery
1
3
3
3
3
2
2
1
tibial artery
1
3
2
3
3
2
2
aorta
1
4
4
4
+ See 26 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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