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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
266
candidate regulatory elements
262
gene expression
231
accessible chromatin
221
target gene predictions
149
chromatin state
93
differential activity
58
binding sites
47
variant allelic effects
35
histone modifications
12
Fine-mapped variants
12
eQTL
5
caQTL
Date released
418
September, 2022
292
February, 2021
155
September, 2023
127
November, 2021
77
February, 2024
41
May, 2021
38
March, 2023
35
June, 2020
24
August, 2021
22
January, 2020
22
May, 2020
21
March, 2020
20
January, 2021
16
February, 2023
15
November, 2022
14
February, 2020
12
October, 2022
8
April, 2020
7
October, 2019
6
August, 2018
5
January, 2022
4
August, 2017
4
March, 2024
4
November, 2019
2
May, 2022
1
July, 2020
1
May, 2019
Available data
863
bed bed3+
349
tsv
186
bigWig
145
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1391
Homo sapiens
Biosample type
857
primary cell
362
tissue
146
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1079
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
1024
hg19
361
GRCh38
BIOSAMPLE
TYPE
1391 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
1
13
8
3
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 153 more…
tissue
lung
33
1
17
16
1
left lung
26
13
13
right lung
22
1
11
11
spinal cord
14
1
8
7
1
coronary artery
3
1
3
3
3
2
3
2
1
+ See 30 more…
cell line
A549
21
1
19
18
2
1
EndoC_BH1
8
8
1
3
1
IMR-90
2
1
2
1
2
1
PC-9
2
1
2
1
1
1
WI38
5
1
1
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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