Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
110
target gene predictions
87
candidate regulatory elements
79
accessible chromatin
53
binding sites
52
chromatin state
50
gene expression
33
differential activity
31
histone modifications
19
eQTL
11
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
pQTL
Date released
143
September, 2022
114
February, 2021
53
February, 2024
47
March, 2023
38
May, 2021
20
January, 2021
20
October, 2022
18
June, 2020
18
November, 2021
12
March, 2020
11
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
5
January, 2020
5
January, 2022
3
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
378
bed bed3+
82
tsv
57
bigWig
46
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
538
Homo sapiens
Biosample type
242
cell line
154
tissue
139
primary cell
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
498
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
444
hg19
127
GRCh38
BIOSAMPLE
TYPE
538 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
gene expression
differential activity
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
pQTL
cell line
K562
23
7
1
2
7
1
EndoC_BH1
1
8
8
3
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
+ See 33 more…
tissue
islet of Langerhans
1
6
2
3
11
1
13
1
2
2
2
spinal cord
8
14
1
7
1
body of pancreas
5
8
4
2
1
1
3
pancreas
5
5
5
1
3
1
1
1
endocrine pancreas
4
7
4
+ See 11 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 15 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download