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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
240
candidate regulatory elements
158
target gene predictions
139
chromatin state
65
accessible chromatin
56
histone modifications
39
Fine-mapped variants
34
eQTL
24
binding sites
23
gene expression
20
variant allelic effects
Date released
368
September, 2022
190
February, 2021
43
March, 2020
33
June, 2020
30
January, 2020
22
January, 2022
19
February, 2020
19
May, 2020
19
November, 2021
18
May, 2021
10
August, 2017
8
October, 2022
7
February, 2024
4
March, 2024
4
May, 2019
3
September, 2023
1
November, 2019
Available data
566
bed bed3+
129
bed bed9
75
tsv
32
bigWig
6
bigBed bed9
Organism
797
Homo sapiens
Biosample type
617
tissue
114
cell line
62
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
779
AMP
19
ENCODE
Genome assembly (visualization)
747
hg19
244
GRCh38
BIOSAMPLE
TYPE
798 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
2
3
2
1
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
spinal cord
14
8
7
1
1
sigmoid colon
10
7
5
1
+ See 78 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HT-29
2
2
1
1
1
1
SK-N-MC
2
1
1
1
1
2
+ See 18 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
colon epithelial cell
3
3
enterocyte
3
3
+ See 12 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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