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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
111
accessible chromatin
107
target gene predictions
73
gene expression
72
chromatin state
45
binding sites
37
histone modifications
31
eQTL
19
variant allelic effects
18
differential activity
12
Fine-mapped variants
3
caQTL
2
pQTL
Date released
126
September, 2022
83
February, 2021
54
November, 2021
47
February, 2024
26
June, 2020
22
March, 2020
21
August, 2021
20
May, 2021
17
September, 2023
14
October, 2022
13
January, 2020
12
February, 2020
12
May, 2020
11
March, 2023
10
August, 2017
8
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
May, 2024
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
334
bed bed3+
97
tsv
76
bigWig
62
bed bed9
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
530
Homo sapiens
Biosample type
289
primary cell
141
tissue
51
cell line
48
in vitro differentiated cells
1
stem cell
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
450
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
425
hg19
192
GRCh38
4
hg18
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
530 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
8
3
13
1
1
4
2
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
endothelial cell of hepatic sinusoid
6
4
6
osteoblast
5
2
2
1
3
2
+ See 48 more…
tissue
liver
4
10
1
9
1
2
7
1
1
adipose tissue
2
8
3
6
1
4
1
subcutaneous adipose tissue
2
5
1
6
1
1
3
spinal cord
1
8
7
1
omental fat pad
2
2
2
2
2
3
+ See 10 more…
cell line
HepG2
2
3
2
3
5
GM23248
1
1
1
1
1
HuH-7
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
spinal cord
1
2
+ See 11 more…
in vitro differentiated cells
adipocyte
4
6
1
6
1
1
mesenchymal stem cell
1
3
2
1
1
chondrocyte
5
hepatocyte(AFP)
3
fibroblast
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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