Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
162
target gene predictions
139
accessible chromatin
136
gene expression
133
chromatin state
123
candidate regulatory elements
70
differential activity
32
variant allelic effects
26
eQTL
14
binding sites
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
369
September, 2022
February, 2021
157
September, 2023
53
November, 2021
38
August, 2021
37
June, 2020
29
May, 2020
25
January, 2020
19
February, 2020
19
February, 2024
17
May, 2021
15
March, 2020
15
October, 2022
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
478
bed bed3+
205
tsv
126
bed bed9
90
bigWig
12
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
848
Homo sapiens
Biosample type
445
primary cell
314
tissue
48
cell line
40
in vitro differentiated cells
1
stem cell
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
629
AMP
155
KPMP
53
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
624
hg19
239
GRCh38
2
hg18
month_released!
February, 2021
BIOSAMPLE
TYPE
848 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
gene expression
chromatin state
candidate regulatory elements
differential activity
variant allelic effects
eQTL
binding sites
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
6
2
1
pericyte cell
10
10
1
1
fibroblast of lung
4
4
3
2
fibroblast of cardiac tissue
4
2
3
3
fibroblast of dermis
4
3
3
1
+ See 96 more…
tissue
kidney
14
10
16
14
1
1
right kidney
10
1
10
10
1
renal pelvis
9
2
9
9
1
renal cortex interstitium
9
1
9
9
1
adipose tissue
8
2
6
6
1
4
+ See 25 more…
cell line
HEK293
1
1
1
1
1
ACHN
1
1
1
1
Caki2
1
1
1
1
GM23248
1
1
1
1
RCC 7860
1
1
1
1
+ See 14 more…
in vitro differentiated cells
adipocyte
6
4
6
2
mesenchymal stem cell
3
1
2
2
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download