Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
candidate regulatory elements
83
accessible chromatin
73
target gene predictions
56
chromatin state
47
gene expression
33
binding sites
25
histone modifications
23
eQTL
16
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
144
September, 2022
118
February, 2021
50
November, 2021
22
June, 2020
18
February, 2024
May, 2021
17
September, 2023
13
October, 2022
12
March, 2020
11
August, 2021
11
January, 2020
10
February, 2020
10
May, 2020
7
August, 2017
7
January, 2022
7
March, 2023
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
338
bed bed3+
67
tsv
55
bigWig
49
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
479
Homo sapiens
Biosample type
280
primary cell
126
tissue
38
in vitro differentiated cells
34
cell line
1
stem cell
Organ
900
epithelium
652
kidney
455
brain
437
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
89
bone element
87
eye
85
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
403
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
407
hg19
135
GRCh38
2
hg18
month_released!
November, 2022
May, 2021
BIOSAMPLE
TYPE
479 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
5
1
1
2
3
2
fibroblast of lung
6
3
4
2
foreskin fibroblast
6
1
1
1
4
2
+ See 42 more…
tissue
adipose tissue
7
1
7
6
3
1
4
1
spinal cord
14
1
7
7
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 6 more…
in vitro differentiated cells
adipocyte
4
3
2
6
1
1
1
mesenchymal stem cell
3
1
2
2
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 6 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
spinal cord
1
2
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download