Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
61
accessible chromatin
34
candidate regulatory elements
18
target gene predictions
8
binding sites
4
histone modifications
3
Fine-mapped variants
2
eQTL
2
gene expression
2
variant allelic effects
Date released
34
September, 2022
26
February, 2021
24
February, 2023
22
November, 2022
8
June, 2020
4
November, 2021
3
February, 2020
3
January, 2020
3
March, 2020
3
October, 2022
2
May, 2020
1
February, 2024
1
May, 2021
Available data
127
bed bed3+
36
bigWig
17
bed bed9
7
tsv
Organism
134
Homo sapiens
Biosample type
93
tissue
23
primary cell
12
cell line
6
in vitro differentiated cells
Organ
871
epithelium
560
kidney
395
connective tissue
376
brain
295
musculature of body
240
lung
235
pancreas
231
intestine
227
vasculature
202
heart
192
limb
191
bodily fluid
188
embryo
182
blood
170
blood vessel
167
skin of body
139
large intestine
129
liver
112
extraembryonic component
100
eye
95
stomach
78
uterus
74
bone element
73
mammary gland
71
adipose tissue
64
prostate gland
64
small intestine
62
artery
58
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
39
gonad
38
thymus
35
esophagus
34
spinal cord
27
spleen
20
nerve
20
testis
19
lymphatic vessel
19
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
Project
130
AMP
4
ENCODE
Genome assembly (visualization)
131
hg19
11
GRCh38
BIOSAMPLE
TYPE
134 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
histone modifications
Fine-mapped variants
eQTL
gene expression
variant allelic effects
tissue
retina
23
6
3
1
1
1
1
1
spinal cord
1
14
8
pigmented layer of retina
20
eye
1
4
2
C1 segment of cervical spinal cord
3
1
1
+ See 1 more…
primary cell
retinal pigment epithelial cell
3
2
1
2
1
iris pigment epithelial cell
1
2
1
astrocyte of the spinal cord
2
1
fibroblast of the conjunctiva
2
1
Muller cell
2
+ See 2 more…
cell line
WERI-Rb-1
1
2
1
2
1
spinal cord
1
2
fibroblast of the conjunctiva
1
retinal cell
1
in vitro differentiated cells
retinal pigment epithelial cell
6
See all biosamples
Download