Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
104
candidate regulatory elements
87
accessible chromatin
67
target gene predictions
13
binding sites
12
variant allelic effects
10
histone modifications
5
chromatin state
2
caQTL
Date released
106
September, 2022
72
February, 2021
27
February, 2023
22
November, 2022
14
November, 2021
13
June, 2020
12
May, 2020
11
January, 2020
6
February, 2024
6
March, 2020
4
May, 2021
3
November, 2019
3
October, 2022
1
October, 2019
Available data
300
bed bed3+
63
bed bed9
58
bigWig
36
tsv
10
bigBed bed9
Organism
300
Homo sapiens
Biosample type
227
tissue
47
primary cell
20
cell line
6
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
286
AMP
14
ENCODE
Genome assembly (visualization)
298
hg19
38
GRCh38
BIOSAMPLE
TYPE
300 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
caQTL
tissue
heart
37
5
20
1
2
1
retina
6
23
3
1
1
1
heart left ventricle
11
3
7
2
1
spinal cord
14
1
8
pigmented layer of retina
20
+ See 9 more…
primary cell
fibroblast of cardiac tissue
3
2
4
retinal pigment epithelial cell
2
3
1
2
1
iris pigment epithelial cell
2
1
1
astrocyte of the spinal cord
2
1
cardiac fibroblast
3
+ See 10 more…
cell line
WERI-Rb-1
2
1
1
2
1
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
spinal cord
1
2
fibroblast of the conjunctiva
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
See all biosamples
Download