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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
81
candidate regulatory elements
75
target gene predictions
73
accessible chromatin
54
binding sites
44
chromatin state
29
histone modifications
5
eQTL
3
Fine-mapped variants
3
gene expression
2
variant allelic effects
1
pQTL
Date released
126
September, 2022
100
February, 2021
29
February, 2024
24
February, 2023
22
November, 2022
22
October, 2022
20
June, 2020
5
May, 2021
4
November, 2021
3
August, 2021
3
February, 2020
3
January, 2020
3
March, 2020
2
August, 2017
2
May, 2020
1
January, 2022
1
March, 2024
Available data
317
bed bed3+
42
bed bed9
36
bigWig
8
tsv
Organism
370
Homo sapiens
Biosample type
218
cell line
110
tissue
36
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
366
AMP
4
ENCODE
Genome assembly (visualization)
365
hg19
82
GRCh38
BIOSAMPLE
TYPE
370 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
chromatin state
histone modifications
eQTL
Fine-mapped variants
gene expression
variant allelic effects
pQTL
cell line
K562
7
23
1
2
7
1
GM12878
2
8
1
2
2
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
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tissue
retina
6
3
23
1
3
1
1
1
1
spinal cord
14
8
1
7
1
pigmented layer of retina
20
eye
4
2
1
2
C1 segment of cervical spinal cord
1
3
1
+ See 4 more…
primary cell
retinal pigment epithelial cell
2
1
3
2
1
1
peripheral blood mononuclear cell
4
1
1
iris pigment epithelial cell
2
1
1
1
astrocyte of the spinal cord
2
1
1
fibroblast of the conjunctiva
2
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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